% Load the Runs table from the database
db = DBHandler("pathToDB", 'C:\Users\Silas\Documents\MATLAB\Datensätze\sioe_labor\silas_labor.db');
runsTable = db.queryDB(db.tables, {'Runs.run_id', 'Runs.tx_bits_path', 'Runs.tx_symbols_path', 'Runs.rx_sync_path', 'Runs.rx_raw_path', 'Runs.filename'});

% Initialize an array to store the result of existence check
fileExistenceResults = false(height(runsTable), 4); % 4 columns for the paths: tx_bits, tx_symbols, rx_sync, rx_raw

% Main file path
sioe_labor_path = 'C:\Users\Silas\Documents\MATLAB\Datensätze\sioe_labor';

% Loop through all rows in the table and check paths
for i = 1:height(runsTable)
    fileExistenceResults(i, 1) = exist([sioe_labor_path, runsTable.tx_bits_path{i}], 'file') == 2;
    fileExistenceResults(i, 2) = exist([sioe_labor_path, runsTable.tx_symbols_path{i}], 'file') == 2;
    fileExistenceResults(i, 3) = exist([sioe_labor_path, runsTable.rx_sync_path{i}], 'file') == 2;
    fileExistenceResults(i, 4) = exist([sioe_labor_path, runsTable.rx_raw_path{i}], 'file') == 2;
end

% Identify corrupted run_ids (where any path does not exist)
corruptedRunIds = runsTable.run_id(~all(fileExistenceResults, 2));

% Delete entries in all tables related to corrupted run_ids
for i = 1:numel(corruptedRunIds)
    run_id = corruptedRunIds(i);

    % Delete from BERs table
    db.executeSQL(sprintf('DELETE FROM BERs WHERE run_id = %d;', run_id));

    % Delete from Equalizer table (if applicable)
    db.executeSQL(sprintf('DELETE FROM Equalizer WHERE eq_id IN (SELECT eq_id FROM BERs WHERE run_id = %d);', run_id));

    % Delete from Measurements table
    db.executeSQL(sprintf('DELETE FROM Measurements WHERE run_id = %d;', run_id));

    % Delete from Configurations table
    db.executeSQL(sprintf('DELETE FROM Configurations WHERE run_id = %d;', run_id));

    % Delete from Runs table
    db.executeSQL(sprintf('DELETE FROM Runs WHERE run_id = %d;', run_id));
end
% 
% disp('Entries for corrupted run_ids have been removed from the database.');